Hotels in Mission Bay, San Diego

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Travel insights for hotels in Mission Bay

Use these up-to-date, data-driven insights about booking a hotel in Mission Bay including ideal times to book, pricing trends, and more.

What is the cheapest month to book a hotel in Mission Bay?

The cheapest month to book a hotel in Mission Bay is December (C$ 257). Conversely, the most expensive month to stay in Mission Bay is July (C$ 814).

What is the cheapest day to stay in a hotel in Mission Bay?

The cheapest day to stay in Mission Bay is Sunday (C$ 476). On the other hand, travelers can expect to pay the most on Monday, when the average nightly price is C$ 1,085.

How much is a hotel in Mission Bay tonight?

Users have found prices for hotels in Mission Bay tonight starting as low as C$ 370, rising to an average cost of C$ 414, based on searches in the last 72 hours. Prices start from C$ 295 for a 4-star hotel in Mission Bay for tonight.

How much is a Mission Bay hotel room this weekend?

In the past 72 hours, we’ve seen prices for hotels in Mission Bay this weekend for as little as C$ 363/night. If you’re specifically looking for a 3-star hotel this weekend, our users have found prices as low as C$ 396/night. For a 4-star hotel in Mission Bay, the cheapest rate recently found was C$ 405/night for this weekend.

Cheapest hotels in Mission Bay, San Diego

Discover affordable stays in Mission Bay that provide a quality experience without breaking the bank. Hotels in Mission Bay can be found for as low as C$ 253 per night. There is currently one property in Mission Bay that can be booked for this price. The Dana on Mission Bay is one of the hotels that can be booked for the lowest price in Mission Bay. Price data was last updated on 25 August 2025
These Mission Bay properties charge the lowest price per night of those we've come across. If you have the flexibility, change the dates selected to compare prices.
1710 West Mission Bay Drive, San Diego, CA, United States
9.4 km from city centre
C$ 253
Avg. per night
1775 East Mission Bay Drive, San Diego, CA, United States
8.6 km from city centre
Free Wi-Fi
C$ 331
Avg. per night
998 West Mission Bay Drive, San Diego, CA, United States
10.4 km from city centre
Free Wi-Fi
C$ 331
Avg. per night
1441 Quivira Road, San Diego, CA, United States
9.6 km from city centre
Free Wi-Fi
C$ 337
Avg. per night
3999 Mission Boulevard, San Diego, CA, United States
12.2 km from city centre
Free Wi-Fi
C$ 351
Avg. per night
1404 Vacation Road, San Diego, CA, United States
10.1 km from city centre
C$ 356
Avg. per night
707 Pacific Beach Drive, San Diego, CA, United States
12.3 km from city centre
Free Wi-Fi
C$ 376
Avg. per night

Hotel prices in Mission Bay

Get a sense of the average price and most popular properties to stay in Mission Bay to help you budget for your trip accordingly. Hotels that are booked the most in each class receive the “Most popular” badge. Hotels with the “Best value” badge are the most popular hotels in Mission Bay at attractive prices. Price data was last updated on 25 August 2025.
Some of the best options for booking a hotel in Mission Bay categorized by hotel class. We've highlighted the most popular properties according to our users as well as the best value within each hotel class.
4 stars +
1404 Vacation Road, San Diego, CA, United States
C$ 356
3999 Mission Boulevard, San Diego, CA, United States
C$ 351
707 Pacific Beach Drive, San Diego, CA, United States
C$ 376
3 stars
998 West Mission Bay Drive, San Diego, CA, United States
C$ 331
1710 West Mission Bay Drive, San Diego, CA, United States
C$ 253

Where to stay in Mission Bay

Explore different neighbourhoods and areas within Mission Bay to find the perfect location for your stay. Map data was last updated on 25 August 2025.
Use the map to find hotels in Mission Bay that are close to the points of interest you'll be frequenting. As an added benefit, users can click a hotel they're interesting in to find helpful information and deals for that hotel.

Facts about staying in Mission Bay, San Diego

Find useful tips and insights about staying in Mission Bay to help you make the most of your experience. FAQs were last updated on 25 August 2025.
  • What are the best hotels in Mission Bay?

    Paradise Point Resort & Spa, rated with a score of 8.1 from 1,874 reviewers, is one of the most popular hotels in Mission Bay. Other top stays include Bahia Resort Hotel, with an average rating of 8.2 from 1,531 reviewers, and Hyatt Regency Mission Bay Spa And Marina, with a score of 7.6 from 2,631 reviewers.

  • What is a good hotel near San Diego Convention Center?

    With a rating of 7.7/10 from 3,821 reviews, Wyndham San Diego Bayside is a hotel close to San Diego Convention Center that is well recommended by HotelsCombined users.

  • What is a good hotel in Mission Bay near B Street Cruise Ship Terminal?

    Wyndham San Diego Bayside is a hotel near B Street Cruise Ship Terminal that is popular with HotelsCombined users, scoring 7.7 from 3,821 reviews.

  • Is there a good hotel near Mission Beach?

    If you’re visiting Mission Beach then the nearby Paradise Point Resort & Spa is a popular hotel with HotelsCombined users (1,874 reviews scoring it at an average 8.1/10).

  • How much is a cheap hotel in Mission Bay?

    HotelsCombined users have found cheap hotels in Mission Bay starting from C$ 58 per night in the last 3 days.

  • What are the most popular landmarks to visit in Mission Bay?

    The most popular landmark in Mission Bay is San Diego Convention Center located in San Diego, followed by B Street Cruise Ship Terminal and Mission Beach, located in San Diego and San Diego, respectively. Depending on where and how long you plan on staying in Mission Bay, you may be able to visit at least one of these cities.

See more FAQs

Find better results for your stay in Mission Bay

Consider these popular 3-star hotels in Mission Bay

Stay at one of these Mission Bay 3-star hotels that users have found on HotelsCombined.

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